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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899137.1_cds_XP_016449100.1_43689
CDS Infomation

[gene=LOC107774137] [db_xref=GeneID:107774137] [protein=2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase-like isoform X2] [protein_id=XP_016449100.1] [location=complement(join(146254..146468,146866..146986,147133..147231,149106..149445,149915..150401,151124..151295))] [gbkey=CDS]
Sequence

ATGAATACTTGTCTACTTCATCTGCAACTGCCTTGTTGTCTCACCTATCCTCAACTGCAC
TTACAAATTAGGAGGAAGCAATATTTTCATTCTATTTGGGGAAAACCAATCTCGAAGTCT
TTCCCAATTGTAGCTTTTGCTGCTGCTTCTTTCCCACCTGCTGAATATCCAGGACAACTA
CCCGAGACAAGGCCAAAGCGGAAAAAGCAGATAGCAGGAATAGATCAAGATGAATTACAA
GATCCAACTCTTCTAGCAGATCCTGATAGTTGCTTTTGCGAGTTTAAAGGAGTACAGATA
CACCACAAGATATATGATTCAGAATCACTTGCTACAAACTTGTCAGAAGAAGGGGATAGT
TCTCGATCTCCTAATGCTAATAAAAGAGTGAACATTCCCATGATATTGTTACATGGATTT
GGTGCCTCTATTTATTCATGGAATCGAGTTATGAAGCCATTGGCACAAGTCACAGGATCA
AAAGTTTTGGCCTTTGACAGACCAGCCTTTGGGTTGACTTCAAGGCTGAATCATGTCAAC
CATTCATCTCAGGGAAGTGAAGACACCAGACCCTTTAATCCTTACTCTATGGTATTCTCC
GTGCTGGCCACTCTATACTTCATTGACTTATTAGCAGCTGAGAAGGCAATTCTAGTGGGA
CACTCAGCTGGTTCCCTTGTAGCAGTTGAAGCATATTTTGAAGCACCTAAGCGGGTTGCT
GCCATTATACTTGTTGCGCCAGCAATTCTAGCACCCCTGAATTCAGGCCCTGTAGCTAAG
GACAATCCAAGTGGAAAAAGTAACCAGACTAAAGGCGATGACTTGGAAGTGAACTCTAAA
GGGAATTGGTTTACCACGGTTGTCAGCATTTTGTCAAAGTTATCCCAATATCTTGGACAA
GCAATAGTGCGATTGGTGAAAGGGATGGGAGACATGATAAATTCTTTATATAAGAAAACT
TTATCTGCGTTCTTGCGTTCTACCATTGGTATTATGCTGGTAAGAATGATAATTGATAAG
TTTGGCTTAGCTGCTGTTAGGAATGCTTGGTACGATCCTAAACAAGTTGATGATCATGTC
TTGCAAGGGTATACAAAGCCTCTCAGAGTAAAAGATTGGGATAAGGCTCTGGTGGAGTAT
ACAGTGGCTATGCTTACAGATTCTGCATCTGAATCAAAGCCACCGCTGTCAAAGAGATTG
GGCGAAATCTCATGTCCTGTTCTGATTGTCACTGGTGATAGTGATCGCCTTGTTCCACCA
TGGAATTCTGATAGACTTTCACGGGCCATTCCTGGATCTTGTCTTGAAATAATCAAGAAT
TGTGGCCACTTGCCCCATGAAGAAAAGGTAGAAGAATTTGTATCCATTGTTGACAGATTC
CTTGAAAGAGTTTTTGGGGTGCAAAAAGAGCCCCATCTGCAACCAGCTACTTGA

Peptide Sequence

PEP ID

XP_016449100.1
PEP Infomation

PREDICTED: 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase-like isoform X2 [Nicotiana tabacum]
Sequence

MNTCLLHLQLPCCLTYPQLHLQIRRKQYFHSIWGKPISKSFPIVAFAAASFPPAEYPGQL
PETRPKRKKQIAGIDQDELQDPTLLADPDSCFCEFKGVQIHHKIYDSESLATNLSEEGDS
SRSPNANKRVNIPMILLHGFGASIYSWNRVMKPLAQVTGSKVLAFDRPAFGLTSRLNHVN
HSSQGSEDTRPFNPYSMVFSVLATLYFIDLLAAEKAILVGHSAGSLVAVEAYFEAPKRVA
AIILVAPAILAPLNSGPVAKDNPSGKSNQTKGDDLEVNSKGNWFTTVVSILSKLSQYLGQ
AIVRLVKGMGDMINSLYKKTLSAFLRSTIGIMLVRMIIDKFGLAAVRNAWYDPKQVDDHV
LQGYTKPLRVKDWDKALVEYTVAMLTDSASESKPPLSKRLGEISCPVLIVTGDSDRLVPP
WNSDRLSRAIPGSCLEIIKNCGHLPHEEKVEEFVSIVDRFLERVFGVQKEPHLQPAT

Transcript Sequence

Gene sequence data has not been registered.